Anatomical ROI Analysis
This quiz relates to the content in the FreeSurfer tutorial titled Anatomical ROI Analysis (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROIV6.0)
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Which atlas is the default FreeSurfer aparc+aseg.mgz atlas?
1 point
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What would be your command line to create a table named aseg.vol.table of segmentation volumes for subjects 004, 040, 067 and 092 using the segmentation label for the left putamen, right caudate, and right insula?
Use the order of structures and subjects as listed in the question.
1 point
Which commands can be used to view aseg.vol.table?
1 point
What command can you use to open the look up table (LUT) in the terminal?
1 point
If you are manually drawing or using a pre-existing label, you should register your label to or draw your label on fsaverage.
1 point
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Which command can be used to output stats for a specific label file?
1 point
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What is your command line if you want to output a new stats file named rh.BA32_exvivo.stats using the label rh.BA32_exvivo.label on subject 006 right hemisphere?
Right this command as if you are running it from the SUBJECTS_DIR.
1 point
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