JavaScript isn't enabled in your browser, so this file can't be opened. Enable and reload.
Phenotype Association
Sign in to Google
to save your progress.
Learn more
* Indicates required question
Name or email
*
Your answer
Copy the terminal output after running PrediXcanAssociation.py
Your answer
How long did the run take?
Your answer
What are the top 3 associated genes?
Your answer
How did you sort the associations to find this answer?
0 points
head %>% arrange(pvalue) %>% predixcan_association
arrange(pvalue)
arrange(pvalue) %>% head %>% predixcan_association
predixcan_association %>% arrange(pvalue) %>% head
Clear selection
How many genes are significantly associated with the simulated phenotype? (count the genes with p-value<0.05/total number of tests)
Your answer
How many genes have non-zero true effect sizes?
0 points
1
2
5
7
Clear selection
How many estimated effect sizes are different from 0?
0 points
230
1000
5
1
Clear selection
Which gene is the most likely causal gene?
0 points
CHURC1
SYCE3
RIBC2
SORT1
UPK3A
CARF
Clear selection
How many genes have effects that are significantly (Bonferroni corrected) different from zero?
0 points
10
47
230
7
Clear selection
Submit
Clear form
Never submit passwords through Google Forms.
This form was created inside of The University of Chicago.
Report Abuse
Forms
