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Request Molecular Dynamic simulation service
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How many proteins are you planning to run?
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What is the protein size in terms of amino acid length?
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How many ligands do you have and what type are they (e.g., Drug/Peptide)?
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How many samples would you like to processed?
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Do you have a specific preference for a force field and version ? eg: GROMACS
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Do you have a specific preference for a force field ?
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Is there a particular MD software
and version
you prefer?
eg: GROMACS
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What is the desired duration for the MD simulation (e.g., 100ns)?
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Will you require post-MD analysis? If yes, please specify the type of analysis needed.
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Is there a need for three replicate simulations?
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Are simulations for the apo-protein also required?
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Please write if you have any other specifications & deadline details
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