BCB 716 - Fall 2021: Problem Set #1

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This form collects information about the personalized problem set that appears at the URL:
https://csbio.unc.edu/mcmillan/index.py?run=PS

Email *

Name (First Last) *

UNC ONYEN *

UNC PID *

Which genome aligner were you assigned? *

25 points

bowtie2

bwa-mem2

minimap2

Which dataset were you asked to align? *

25 points

CC010_MRCA_*

CC025_MRCA_*

CC035_MRCA_*

CC019_nanopore.*

CC037_nanopore..*

HGDP00465_*

HGDP00468_*

HGDP00490_*

Did your alignment complete? This question can be answered by examining the "slurm-*.out" file generated by the sbatch alignment script. If the last few lines don't include any mention of an error and a sam file of nonzero size was created, then you should answer "Yes". If you see an error in your slurm file then the answer is "No".

50 points

Yes

I don't know

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